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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LGG rs11253458 chr10:882843 T/C 2.36E-5 405 15.13 17.73 12.17 KM Plot
LGG rs11253459 chr10:886402 C/T 0.000146 402 14.9 17.73 13.3 KM Plot
LGG rs11253460 chr10:887382 C/G 2.63E-5 403 14.9 17.73 12.17 KM Plot
LGG rs11253462 chr10:889323 T/G 0.000163 400 14.6 17.73 13.3 KM Plot
LGG rs11253465 chr10:897208 A/C 2.66E-6 405 15.13 17.73 10.57 KM Plot
LGG rs11253467 chr10:901244 A/G 2.66E-6 405 15.13 17.73 10.57 KM Plot
LGG rs11253468 chr10:903261 G/A 2.83E-6 403 15.17 17.73 10.57 KM Plot
LGG rs11253473 chr10:906826 A/G 2.81E-6 404 15.13 17.73 10.57 KM Plot
LGG rs11253475 chr10:907262 C/A 2.66E-6 405 15.17 17.73 10.57 KM Plot
LGG rs11253485 chr10:919362 C/T 2.69E-6 405 15.13 17.38 10.57 KM Plot
LGG rs11253488 chr10:922482 G/C 1.06E-5 403 15.02 17.38 8.97 KM Plot
LGG rs11253492 chr10:936873 T/C 3.42E-5 406 15.02 17.73 12.17 KM Plot
LGG rs11253493 chr10:936931 T/C 3.42E-5 406 15.02 17.73 12.17 KM Plot
LGG rs11253494 chr10:937047 C/T 3.35E-5 407 15.02 17.73 13.3 KM Plot
LGG rs11253495 chr10:937064 C/T 3.67E-5 404 15.02 17.73 12.17 KM Plot